IGVFFI0853SCNK

released

validated

File Set

IGVFDS7196OWBU(CRISPR activation FACS screen targeting IL2RA: fold change over control, guide quantifications)

Summary

custom assembly fold change over control

Analysis Step Version

/analysis-step-versions/6a1d20c7-c92f-47d6-8e3b-5c74b3e8eed2/

File Format

tsv

Content Type

fold change over control

Aliases

charles-gersbach:jurkats-guide-quantifications-crispra-vp64x2-il2ra

md5sum

34d0321da6737f87e0a45e23e9e55693

Content MD5sum

14491de5c3de76c62afc0242385c359c

File Size

15 KB

Submitted File Name

/data/reddylab/Alex/IGVF/data_submissions/processed_data/AIM_2_T_cell_project_1/T1D_IL2RA_CRISPRa2xVP64_screen.simple.v2.txt.gz

Reference Source Details

Genome Assembly

custom

File Format Specifications

1 item

Page

Description

Type

Download

Preview

DESeq2 results

file format specification

DESeq2 results file format specification.pdf

Samples

6 items

Sample Terms

Summary

IGVFSM1838CFFU

InVitroSystem

Jurkat

Jurkat cell line, Homo sapiens (sorting details: FACS bin for 0-10% expression of IL2RA ) modified with CRISPRa Sa-dCas9-2xVP64, transduced (lentivirus) with a guide library (MOI of 0.4)

IGVFSM2429HKWG

InVitroSystem

Jurkat

Jurkat cell line, Homo sapiens (sorting details: FACS bin for 0-10% expression of IL2RA ) modified with CRISPRa Sa-dCas9-2xVP64, transduced (lentivirus) with a guide library (MOI of 0.4)

IGVFSM3244YHOI

InVitroSystem

Jurkat

Jurkat cell line, Homo sapiens (sorting details: FACS bin for 90-100% expression of IL2RA ) modified with CRISPRa Sa-dCas9-2xVP64, transduced (lentivirus) with a guide library (MOI of 0.4)

IGVFSM4817IZZH

InVitroSystem

Jurkat

Jurkat cell line, Homo sapiens (sorting details: FACS bin for 90-100% expression of IL2RA ) modified with CRISPRa Sa-dCas9-2xVP64, transduced (lentivirus) with a guide library (MOI of 0.4)

IGVFSM5112IFQB

InVitroSystem

Jurkat

Jurkat cell line, Homo sapiens (sorting details: FACS bin for 0-10% expression of IL2RA ) modified with CRISPRa Sa-dCas9-2xVP64, transduced (lentivirus) with a guide library (MOI of 0.4)

IGVFSM6964ODEE

InVitroSystem

Jurkat

Jurkat cell line, Homo sapiens (sorting details: FACS bin for 90-100% expression of IL2RA ) modified with CRISPRa Sa-dCas9-2xVP64, transduced (lentivirus) with a guide library (MOI of 0.4)