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IGVFFI0802WGXH

released
validation exempted
File Set
IGVFDS3556MYLH(10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix)
Summary
GRCh38 peaks
Analysis Step Version
/analysis-step-versions/699d6738-4033-4afc-b6f3-1d82a80e0b41/
File Format
bed
Content Type
peaks
Aliases
ansuman-satpathy:igvf17_peaks_10x5
md5sum
3caef66e6ea18c0ca877225e9c0da564
Content MD5sum
ce24ca3219a9e3b010601b099eae7131
File Size
3.1 MB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/igvf17/e17l5_peaks.bed
Checkfiles Version
v14
Validation Error Detail
{"md5sum": "original md5sum ce24ca3219a9e3b010601b099eae7131 does not match newly calculated md5sum 3caef66e6ea18c0ca877225e9c0da564.", "validate_files": "Error [file=/home/ubuntu/igvf-files/2025/01/28/0f48ff99-c956-43ed-80a1-0cd9e2fc5761/IGVFFI0802WGXH.bed.gz, line=377346]: chrom KI270727.1 not found [KI270727.1\t52074\t52957]\nAborting ... found error."}
Attribution
Ansuman Satpathy, Stanford

Reference Source Details

Genome Assembly
GRCh38

File Format Specifications

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female) RUES2 differentiated cell specimen induced to gastrula for 2 days; Homo sapiens (female) RUES2 differentiated cell specimen induced to gastrula for 1 day; ... and 10 more samples

Files This File Derives From

1 item
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
tsv
fragments
Ansuman Satpathy, Stanford
4.8 GB
validation exempted