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IGVFFI0765KKLP

released
validated
File Set
IGVFDS3251QBOZ(CRISPR activation RNA-seq integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci)
Summary
differential gene expression quantifications
Analysis Step Version
/analysis-step-versions/9baf263b-8055-4e7d-9906-532d71e72264/
File Format
csv
Content Type
differential gene expression quantifications
Aliases
jay-shendure:tabularfile_S16_Chardon-McDiarmid
md5sum
8a053895743810a1d7cd2575ea3c59bb
Content MD5sum
2b4fff4a2c292465481aa4db0a18a1da
File Size
39 KB
Submitted File Name
/net/shendure/vol1/home/martin91/IGVF/forupload/CRISPRa/41467_2024_52490_MOESM19_ESM.csv.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jay Shendure, UW

File Format Specifications

1 item
Page
Description
Type
Download
Standardized File Format
Preview
File format specification for Singleton Validations
file format specification

Samples

6 items
Sample Terms
Summary
InVitroSystem
Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to neuron for 19 days modified with CRISPRa Sp-dCas9-VPH, transfected with a guide library
InVitroSystem
Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to neuron for 19 days modified with CRISPRa Sp-dCas9-VPH, transfected with a guide library
InVitroSystem
Homo sapiens (female) K562 cell line modified with CRISPRa Sp-dCas9-VP64, transfected with a guide library
InVitroSystem
Homo sapiens (female) K562 cell line modified with CRISPRa Sp-dCas9-VP64, transfected with a guide library
InVitroSystem
Homo sapiens (female) K562 cell line modified with CRISPRa Sp-dCas9-VP64, transfected with a guide library
InVitroSystem
Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to neuron for 19 days modified with CRISPRa Sp-dCas9-VPH, transfected with a guide library

Files This File Derives From

47 items
fastq
reads
Jay Shendure, UW
190 MB
validated
fastq
reads
Jay Shendure, UW
115 MB
validated
fastq
reads
Jay Shendure, UW
404 MB
validated
fastq
reads
Jay Shendure, UW
245 MB
validated
fastq
reads
Jay Shendure, UW
261 MB
validated
fastq
reads
Jay Shendure, UW
621 MB
validated
fastq
reads
Jay Shendure, UW
269 MB
validated
fastq
reads
Jay Shendure, UW
311 MB
validated
fastq
reads
Jay Shendure, UW
903 MB
validated
fastq
reads
Jay Shendure, UW
152 MB
validated

Documents

1 item
Page
Description
Type
Download
Standardized File Format
Preview
File format specification for Singleton Validations
file format specification