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IGVFFI0758KPCO

released
validation exempted
File Set
IGVFDS6443DIXD(single-nucleus ATAC-seq (10x multiome with MULTI-seq), single-nucleus RNA sequencing assay (10x multiome with MULTI-seq): cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix)
Summary
GRCh38 peaks
Analysis Step Version
/analysis-step-versions/699d6738-4033-4afc-b6f3-1d82a80e0b41/
File Format
bed
Content Type
peaks
Aliases
ansuman-satpathy:igvf12_peaks_10x6
md5sum
583a65883e46e625f41f7ff877f6bdc1
Content MD5sum
52c2b0551291acde12c8c145c4345188
File Size
1.3 MB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/igvf12/e12l6_peaks.bed
Checkfiles Version
v14
Validation Error Detail
{"md5sum": "original md5sum 52c2b0551291acde12c8c145c4345188 does not match newly calculated md5sum 583a65883e46e625f41f7ff877f6bdc1.", "validate_files": "Error [file=/home/ubuntu/igvf-restricted-files/2025/01/28/389dfbaa-c316-4acc-8b6f-1f561ba5fbfe/IGVFFI0758KPCO.bed.gz, line=152761]: chrom KI270728.1 not found [KI270728.1\t232289\t233189]\nAborting ... found error."}
Attribution
Ansuman Satpathy, Stanford

Reference Source Details

Genome Assembly
GRCh38

File Format Specifications

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 6 days; Homo sapiens (female) B differentiated cell specimen induced to plasmablast for 5 days; ... and 10 more samples

Files This File Derives From

1 item
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
tsv
fragments
Ansuman Satpathy, Stanford
6.8 GB
validation exempted