IGVFFI0595ICZF

released
validation exempted
File Set
IGVFDS9170BNTS(10x multiome with MULTI-seq: cell hashing barcodes, fragments, index, peaks, raw feature barcode matrix)
Summary
GRCh38 peaks
Analysis Step Version
File Format
bed
Content Type
peaks
Aliases
ansuman-satpathy:igvf3_peaks_10x1
md5sum
6766bc571e3d73c30aa599827d059a98
Content MD5sum
10d8324f83bf9e10b1bda6782e4e5fff
File Size
2.0 MB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/analysis_sets/igvf3/e3l1_peaks.bed
Checkfiles Version
Validation Error Detail
{"md5sum": "original md5sum 10d8324f83bf9e10b1bda6782e4e5fff does not match newly calculated md5sum 6766bc571e3d73c30aa599827d059a98.", "validate_files": "Error [file=/home/ubuntu/igvf-files/2025/01/28/d48e3a7c-7532-47e1-8988-27adf42d7662/IGVFFI0595ICZF.bed.gz, line=241379]: chrom KI270728.1 not found [KI270728.1\t232282\t233179]\nAborting ... found error."}

Reference Source Details

Genome Assembly
GRCh38

File Format Specifications

Samples

4 items
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: H9 differentiated cell specimen induced to cardiac muscle cell for 15 days, female, Homo sapiens; HepG2 cell line, male, Homo sapiens grown in DMEM without serum; ... and 10 more samples
MultiplexedSample
multiplexed sample: H9 differentiated cell specimen induced to cardiac muscle cell for 15 days, female, Homo sapiens; HepG2 cell line, male, Homo sapiens grown in DMEM without serum; ... and 10 more samples
MultiplexedSample
multiplexed sample: H9 differentiated cell specimen induced to cardiac muscle cell for 15 days, female, Homo sapiens; HepG2 cell line, male, Homo sapiens grown in DMEM without serum; ... and 10 more samples
MultiplexedSample
multiplexed sample: H9 differentiated cell specimen induced to cardiac muscle cell for 15 days, female, Homo sapiens; HepG2 cell line, male, Homo sapiens grown in DMEM without serum; ... and 10 more samples

Files This File Derives From

1 item
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
tsv
fragments
Ansuman Satpathy, Stanford
3.1 GB
validation exempted

Attribution