IGVFFI0462IJUO

released
validated
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    "@context": "/terms/",
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    "@type": [
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    ],
    "accession": "IGVFFI0462IJUO",
    "aliases": [
        "charles-gersbach:tabular-file-crispri-count"
    ],
    "analysis_step_version": "/analysis-step-versions/7a065c7f-9076-4e55-ae0a-8c0ae1b1c13e/",
    "assay_titles": [
        "HiCAR"
    ],
    "assembly": "GRCh38",
    "audit": {},
    "award": {
        "@id": "/awards/HG012053/",
        "component": "functional characterization"
    },
    "barcode_map_for": [],
    "content_md5sum": "8c842b9af2aaffd3b23029d7c6ac02c4",
    "content_type": "bin paired count",
    "controlled_access": false,
    "creation_timestamp": "2024-10-28T19:42:40.935893+00:00",
    "derived_from": [
        "/matrix-files/IGVFFI5479PYGH/",
        "/matrix-files/IGVFFI5392WHLQ/",
        "/matrix-files/IGVFFI7206XUNB/",
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        "accession": "IGVFDS8114MQYA",
        "file_set_type": "principal analysis",
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                "status": "released",
                "summary": "GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 42 days, male, Homo sapiens transfected with a guide library",
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                "targeted_sample_term": {
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                        "status": "released",
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                "status": "released",
                "summary": "GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 42 days, male, Homo sapiens transfected with a guide library",
                "targeted_sample_term": {
                    "@id": "/sample-terms/CL_0000746/",
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                "taxa": "Homo sapiens"
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                "@id": "/in-vitro-systems/IGVFSM7879FDUK/",
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                        "status": "released",
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                    }
                ],
                "status": "released",
                "summary": "GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 42 days, male, Homo sapiens transfected with a guide library",
                "targeted_sample_term": {
                    "@id": "/sample-terms/CL_0000746/",
                    "status": "released",
                    "term_name": "cardiac muscle cell"
                },
                "taxa": "Homo sapiens"
            }
        ],
        "status": "released",
        "summary": "HiCAR: bin paired count, differential chromatin contact quantifications"
    },
    "file_size": 1701,
    "gene_list_for": [],
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    "integrated_in": [],
    "lab": {
        "@id": "/labs/charles-gersbach/",
        "title": "Charles Gersbach, Duke"
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    "release_timestamp": "2024-12-13T19:43:36.530602+00:00",
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    "schema_version": "13",
    "status": "released",
    "submitted_by": {
        "@id": "/users/3782ce69-0e9f-4b46-91f9-4578139785c7/",
        "title": "Ruhi Rai"
    },
    "submitted_file_name": "/hpc/group/gersbachlab/tda17/IGVF_data_files/HiCAR/output/Count_matrix_and_DESeq2/CRISPRi.Region3_vs_nontarget_Union_10kb_count_mat.tsv.gz",
    "summary": "GRCh38 bin paired count",
    "upload_status": "validated",
    "uuid": "fe62c1ad-fd0b-49eb-9868-179164bf5f24"
}