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IGVFFI0099XJHU

released
validated
File Set
IGVFDS5400TMWO(SUPERSTARR: alignments, index, reporter genomic variant effects, reporter variants)
Summary
GRCh38 reporter genomic variant effects
File Format
tsv
Content Type
reporter genomic variant effects
Aliases
tim-reddy:starr-seq-bird-reporter-variant-file-P006
md5sum
eeadeae393b563b8653222903c5348c3
Content MD5sum
56c64ec32c630aa5e387f4b838ac45b6
File Size
164 MB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/processed_data/AIM_1_STARR_seq/K562.starrseq.bird_reporter_variant.pool6.na_empty.txt.gz
Checkfiles Version
v20
Attribution
Bill Majoros, Duke

Reference Source Details

Genome Assembly
GRCh38

File Format Specifications

1 item
Page
Description
Type
Download
Preview
Reporter genomic variant effect file format specification
file format specification

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (female) K562 cell line transfected with a reporter library

Files This File Derives From

2 items
tsv
reporter variants
Bill Majoros, Duke
32 MB
validation exempted
tsv
reporter genomic variant effects
Bill Majoros, Duke
75 MB
validated