IGVFFI0068OWUG

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS6924DJAZ(CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci)
Summary
GRCh38 GENCODE 32 unfiltered global differential expression
Analysis Step Version
File Format
csv
Content Type
unfiltered global differential expression
Aliases
gary-hon:H9_CM_Pilot2_Mini_Inducible_PrimaryAnalysis_DE_global
md5sum
50e87154d1777fce3921e0d3ee44e2d6
Content MD5sum
6b3815091cbc91b4e68e51a7354e4446
File Size
133 KB
Submitted File Name
/project/GCRB/Hon_lab/s215194/IGVF/data_submission/reference_files/H9_CM_Pilot2_Mini_Inducible_PrimaryAnalysis_DE_global.csv.gz
Checkfiles Version
Attribution

Reference Source Details

Genome Assembly
GRCh38
Transcriptome Annotation
GENCODE 32

File Format Specifications

1 item
Page
Description
Type
Download
Standardized File Format
Preview

Samples

4 items
Sample Terms
Summary
InVitroSystem
Homo sapiens (female) H9 differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW424) modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library
InVitroSystem
Homo sapiens (female) H9 differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW423) modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library
InVitroSystem
Homo sapiens (female) H9 differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW421) modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library
InVitroSystem
Homo sapiens (female) H9 differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW422) modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library

Files This File Derives From

2 items
pkl
raw feature barcode matrix
Gary Hon, UT
1.9 GB
validated
hdf5
filtered feature barcode matrix
Gary Hon, UT
513 MB
validated