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INDEXED
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SequenceFile
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IGVFFI9988ZQEV
IGVFFI9988ZQEV
released
validated
Json view
File Set
IGVFDS6986CTKT
(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 6
File Format
fastq
Content Type
reads
md5sum
15005a742424121f063401f84e16dbde
Content MD5sum
d7c7db2fc80d8d18eee84fa162f472a7
File Size
5.4 GB
Submitted File Name
igvf_009/nova2/igvf_009_B09_D_nova_N2_L002_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI
(
HG012077
—
Ali Mortazavi
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
6
Flowcell ID
H5VH3DSX7
Lane
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
153186564
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM2096VJSO
MultiplexedSample
adrenal gland
,
kidney
multiplexed sample: Mus musculus WSB/EiJ (male, 69 days) kidney tissue; Mus musculus CAST/EiJ (male, 72 days) kidney tissue; ... and 126 more samples
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8173KPQX
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.5 GB
validated
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7495FYXL
yaml
seqspec
seqspec of IGVFFI1478MAUG, IGVFFI9988ZQEV
Ali Mortazavi, UCI
1.4 KB
validated