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INDEXED
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SequenceFile
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IGVFFI9972YTXM
IGVFFI9972YTXM
released
validated
Json view
File Set
IGVFDS7538AGGA
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8716
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8716_R1
md5sum
15d85119e977617a8857a0b7ad40aecd
Content MD5sum
25cf741002f0e639535f95d7b865e8ec
File Size
446 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2354_L3_SS-PKR-208_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8716
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
9903976
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7197HNOO
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 208)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1141UNRQ
yaml
seqspec
seqspec of IGVFFI9972YTXM, IGVFFI2448PPBI, IGVFFI0805CTRK
Jason Buenrostro, Broad
1.3 KB
validated