{
"@context": "/terms/",
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],
"accession": "IGVFFI9927UHCN",
"aliases": [
"jesse-engreitz:220829_8merInsertion-Jurkat_Stimulation-Amp_PPIF_promoter-BioRep1-FFrep2-BinA-PCRrep2_R1"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released sequence file [IGVFFI9927UHCN](/sequence-files/IGVFFI9927UHCN/) has in progress subobject auxiliary set [IGVFDS3525WUCB](/auxiliary-sets/IGVFDS3525WUCB/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/sequence-files/IGVFFI9927UHCN/"
}
]
},
"award": {
"@id": "/awards/HG011972/",
"component": "functional characterization"
},
"content_md5sum": "5ff456943f3f9df566090d09886e76d2",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-12-05T20:04:59.999740+00:00",
"file_format": "fastq",
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"gene_list_for": [],
"href": "/sequence-files/IGVFFI9927UHCN/@@download/IGVFFI9927UHCN.fastq.gz",
"illumina_read_type": "R1",
"index": "TGCTGCTG:GTCA",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/jesse-engreitz/",
"title": "Jesse Engreitz, Stanford"
},
"loci_list_for": [],
"maximum_read_length": 150,
"md5sum": "8efb272c30d7cc90b422138ba099689e",
"mean_read_length": 150,
"minimum_read_length": 150,
"read_count": 396833,
"release_timestamp": "2023-12-20T23:23:32.621688+00:00",
"s3_uri": "s3://igvf-files/2023/12/05/e5d8b9fd-655d-4354-8ea8-ae4be9e053e7/IGVFFI9927UHCN.fastq.gz",
"schema_version": "14",
"seqspecs": [],
"sequencing_platform": "/platform-terms/EFO_0008566/",
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"status": "released",
"submitted_by": {
"@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
"title": "Michael Montgomery"
},
"submitted_file_name": "220829_pPPIF_JurkatVFF-Jurkat-PE2A-BFP-pPPIF-Amp_pPPIF2_S13-BioRep1-FFRep2-BinA-PCRrep2_S177_R1_001.fastq.gz",
"summary": "R1 reads from sequencing run 1",
"upload_status": "validated",
"uuid": "e5d8b9fd-655d-4354-8ea8-ae4be9e053e7"
}