IGVFFI9878UMBG

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS5164BIQZ(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP030_G8_P078_L008_R1

md5sum

6b53f1932af8b7fe52ef5ad0396e1f98

Content MD5sum

fb421b9cdbe99bd4b54da2db15f60398

File Size

16 GB

Submitted File Name

Multiome_RNA_RP030_G8_L008_P078_S80_L008_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

181513022

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3517DKCV

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, Parkinson's disease

multiplexed sample: Homo sapiens (female, 79 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 6 more samples