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INDEXED
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SequenceFile
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IGVFFI9865QXSI
IGVFFI9865QXSI
released
validated
Json view
File Set
IGVFDS3957EPTF
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8906
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8906_R1
md5sum
1e591e9288c0ae97ac8532dc873a3dc0
Content MD5sum
8b15f6ac981eb88eed33a53a536206f6
File Size
402 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2352_L5_SS-PKR-208_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8906
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
8848009
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2495KWSE
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 208)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2367QBBK
yaml
seqspec
seqspec of IGVFFI9865QXSI, IGVFFI2783UVSX, IGVFFI6125AYOH
Jason Buenrostro, Broad
1.3 KB
validated