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INDEXED
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SequenceFile
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IGVFFI9847OMTV
IGVFFI9847OMTV
released
validated
Json view
File Set
IGVFDS9761JBSK
(reporter library targeting random selections genome-wide)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
tim-reddy:starr-seq-dna-fastq-k562-P010-R1
md5sum
b1fd378b5c046cf22d654ccb9eed5770
Content MD5sum
1d5ca6063264296321c59577defcd225
File Size
6.7 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_1_STARR_seq/K562.starrseq.dna.pool10.R1.fastq.gz
Checkfiles Version
v17
Attribution
Tim Reddy, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AACNYKFM5
Lane
1
Sequencing Kit
NextSeq 2000 P3 XLEAP-SBS Reagent Kit
Illumina Read Type
R1
Average Read Length
301
Read Count
47649990
Files Derived From This File
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9296PRAF
bam
alignments
custom assembly unfiltered alignments
Tim Reddy, Duke
7.2 GB
validated
IGVFFI9674XWSK
bam
alignments
GRCh38 unfiltered alignments
Tim Reddy, Duke
7.0 GB
validated