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IGVFFI9846ECMS

released
validated
File Set
IGVFDS2259DWKL(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-HuIBD01-1-orgs-more-ATAC.R1.fastq.gz
md5sum
20791df01e1ea5aaa15ac135aa01eb9e
Content MD5sum
968b773bc5729e09de1adcc9651293bc
File Size
9.9 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/HuIBD01-1-orgs-more-ATAC.R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
49.06
Read Count
299990437

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens colon epithelial cell organoid induced to colon for 7 days

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Jason Buenrostro, Broad
1.2 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI9846ECMS, IGVFFI1915BHZZ, IGVFFI1517VBJH
Jason Buenrostro, Broad
1.2 KB
validated