{
"@context": "/terms/",
"@id": "/sequence-files/IGVFFI9822WQUG/",
"@type": [
"SequenceFile",
"File",
"Item"
],
"accession": "IGVFFI9822WQUG",
"aliases": [
"jesse-engreitz:220829_8merInsertion-Jurkat_NoStimulation-Amp_PPIF_promoter-BioRep1-FFrep2-BinA-PCRrep2_R2"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released sequence file [IGVFFI9822WQUG](/sequence-files/IGVFFI9822WQUG/) has in progress subobject auxiliary set [IGVFDS4840LCRI](/auxiliary-sets/IGVFDS4840LCRI/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/sequence-files/IGVFFI9822WQUG/"
}
]
},
"award": {
"@id": "/awards/HG011972/",
"component": "functional characterization"
},
"content_md5sum": "aaf7322cefa21fd1e935852c086d27e2",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-12-05T19:00:10.308121+00:00",
"file_format": "fastq",
"file_set": "/auxiliary-sets/IGVFDS4840LCRI/",
"file_size": 12708511,
"gene_list_for": [],
"href": "/sequence-files/IGVFFI9822WQUG/@@download/IGVFFI9822WQUG.fastq.gz",
"illumina_read_type": "R2",
"index": "CGCCTTCC:CAGT",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/jesse-engreitz/",
"title": "Jesse Engreitz, Stanford"
},
"loci_list_for": [],
"maximum_read_length": 150,
"md5sum": "eceb2c0ba66f16b649295917d4868478",
"mean_read_length": 150,
"minimum_read_length": 150,
"read_count": 361171,
"release_timestamp": "2023-12-20T23:23:31.611911+00:00",
"s3_uri": "s3://igvf-files/2023/12/05/68e8dc93-9034-4fbc-a8ff-0ca9d3dc82cd/IGVFFI9822WQUG.fastq.gz",
"schema_version": "14",
"seqspecs": [],
"sequencing_platform": "/platform-terms/EFO_0008566/",
"sequencing_run": 1,
"status": "released",
"submitted_by": {
"@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
"title": "Michael Montgomery"
},
"submitted_file_name": "220829_pPPIF_JurkatVFF-Jurkat-PE2A-BFP-pPPIF-Amp_pPPIF_S3-BioRep1-FFRep2-BinA-PCRrep2_S64_R2_001.fastq.gz",
"summary": "R2 reads from sequencing run 1",
"upload_status": "validated",
"uuid": "68e8dc93-9034-4fbc-a8ff-0ca9d3dc82cd"
}