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IGVFFI9719ABRM

released
validated
File Set
IGVFDS6433JKUR(quantification DNA barcode sequencing for lentiMPRA integrating a reporter library targeting candidate cis-regulatory elements genome-wide)
Summary
R1 reads from sequencing run 5
File Format
fastq
Content Type
reads
md5sum
40848adb4e790d853ddf3b8ad494fa40
Content MD5sum
e8fc11c18a958ec84ac8d9c54796fbf3
File Size
29 MB
Submitted File Name
"/data/cephfs-2/unmirrored/groups/kircher/IGVF_data_submssion_TM/proximalPromotor/count/HEK293T/run5/run5_dna-1_S1_R1_001.fastq.gz"
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
seqrun5
Attribution
Nadav Ahituv, UCSF

Sequencing Details

Sequencing Platform
Illumina NextSeq 500
Sequencing Run
5
Sequencing Kit
NextSeq 500 High Output v2 Kit
Illumina Read Type
R1
Average Read Length
15
Read Count
1786541

Files Derived From This File

3 items
tsv
reporter experiment
GRCh38 reporter experiment
Nadav Ahituv, UCSF
19 MB
validated
tsv
reporter experiment barcode
GRCh38 reporter experiment barcode
Nadav Ahituv, UCSF
216 MB
validated
tsv
reporter experiment
GRCh38 reporter experiment
Nadav Ahituv, UCSF
18 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI8700AEIZ, IGVFFI5696TVWE, IGVFFI4239VWVU, IGVFFI8189BJZT, IGVFFI5550ERUF, IGVFFI7885EZPH, IGVFFI9719ABRM, IGVFFI0502IWHU, IGVFFI7430OIYQ, IGVFFI3079XQNL, IGVFFI1112FCCP, IGVFFI4073RBEH
Nadav Ahituv, UCSF
1.8 KB
validation exempted