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INDEXED
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SequenceFile
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IGVFFI9706EHIQ
IGVFFI9706EHIQ
released
validated
Json view
File Set
IGVFDS3638UVNV
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 43
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2001_R2
bradley-bernstein:SS-LS_43_R2
buenrostro-bernstein:SS-LS_2001_R2
buenrostro-bernstein:SS-LS_43_R2
md5sum
62b5370bf1fdaffe26ab71f7ec18db46
Content MD5sum
df1271a3542a25735460c43b8845bb5f
File Size
412 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-154_L1_SS-PKR-129_SS-V1-RIGHT-HALF_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
43
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
8386465
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3932SXVT
Tissue
brain
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 129)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9026GHLA
yaml
seqspec
seqspec of IGVFFI5944WRFT, IGVFFI9706EHIQ
Jason Buenrostro, Broad
1.2 KB
validated