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IGVFFI9706EHIQ

released
validated
File Set
IGVFDS3638UVNV(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 43
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2001_R2
bradley-bernstein:SS-LS_43_R2
buenrostro-bernstein:SS-LS_2001_R2
buenrostro-bernstein:SS-LS_43_R2
md5sum
62b5370bf1fdaffe26ab71f7ec18db46
Content MD5sum
df1271a3542a25735460c43b8845bb5f
File Size
412 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-154_L1_SS-PKR-129_SS-V1-RIGHT-HALF_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
43
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
8386465

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 129)

Files Derived From This File

2 items
bed
fragments
GRCm39 unfiltered fragments
Jason Buenrostro, Broad
431 MB
validated
bam
alignments
GRCm39 unfiltered alignments
Jason Buenrostro, Broad
3.1 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI5944WRFT, IGVFFI9706EHIQ
Jason Buenrostro, Broad
1.2 KB
validated