Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI9683RWGO
IGVFFI9683RWGO
released
validated
Json view
File Set
IGVFDS4653HFNR
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 5361
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5361_R1
md5sum
10d6590a6852d5e1896034a9c507bb98
Content MD5sum
6be41101d0efb229dce8491d1d6b568b
File Size
7.2 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1576_L1_SS-PKR-434_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5361
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
165590956
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3216RCJI
yaml
seqspec
seqspec of IGVFFI9683RWGO, IGVFFI6211UCEG
Jason Buenrostro, Broad
1.2 KB
validated