Home
Home
Search (⌘K or ⌃K)
Data
Resources / Standards
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI9672VHPG
IGVFFI9672VHPG
released
validated
Json view
File Set
IGVFDS3673RLHA
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8999
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8999_R1
md5sum
3bf2fe2c469636a8d36aa7799ac69c8a
Content MD5sum
7af7e3dfee241f5b9daeeea4e48a1baf
File Size
443 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2349_L6_SS-PKR-208_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8999
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
9704059
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5530BECA
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 208)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9717EDUL
yaml
seqspec
seqspec of IGVFFI9672VHPG, IGVFFI0191IIHJ, IGVFFI7899NPVT
Jason Buenrostro, Broad
1.3 KB
validated