IGVFFI9667BHUU

released
validated
File Set
IGVFDS8943QPCP(CRISPR HiCAR integrating a guide (sgRNA) library targeting accessible genome regions in a genomic locus)
Summary
R1 reads from sequencing run 4
File Format
fastq
Content Type
reads
Aliases
charles-gersbach:measurement-set-crispra-region3-mouse-hl1-targeted-hicar-rep2-R1
md5sum
7660cbc4ac8b71c85df36fe7eabbec2c
Content MD5sum
8389411314d9c07c2d2226afbdf8a217
File Size
1.1 GB
Submitted File Name
/hpc/group/gersbachlab/tda17/IGVF_data_files/HiCAR/fastq/crispra_mouse/crispra_hicar_mouse_fastq/HL_1_TA446_2_noET1_ds.944e08b21dcc4f068173cb96fe66decb/HL_1_TA446_2_noET1_S15_L001_R1_001.fastq.gz

Sequencing Details

Sequencing Platform
Sequencing Run
4
Sequencing Kit
NextSeq 1000/2000 P2 Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
22587957

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
HL-1 cell line, female, Mus musculus C57BL/6J transfected with a guide library

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
mcool
contact matrix
genomic position by genomic position in contact matrix
Charles Gersbach, Duke
52 MB
validated

Attribution