IGVFFI9661VZDA

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9761PWQX(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP029_G5_P078_L007_R1

md5sum

5ed80c9a35e8b826ad538d2789c77e14

Content MD5sum

0f49127e6b00b1fee2abcdab52c560f9

File Size

12 GB

Submitted File Name

Multiome_RNA_RP029_G5_L005_P078_S69_L007_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

130681214

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8863JLWX

MultiplexedSample

posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 74 years) putamen tissue associated with Parkinson's disease; Homo sapiens (male, 89 years) posterior cingulate gyrus tissue; ... and 6 more samples