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INDEXED
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SequenceFile
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IGVFFI9654PVVK
IGVFFI9654PVVK
released
validated
Json view
File Set
IGVFDS6909NSFT
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 5365
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5365_R2
md5sum
4d4d6b9f72e55d909e5ea53ab73be69e
Content MD5sum
c1e933eb61d616fb20ddf5244cef1fb0
File Size
9.4 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1575_L2_SS-PKR-433_2022-APRIL-R1-SET-OF-192_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5365
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
199
Read Count
149253593
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9503WHHQ
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 433)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2731URZQ
yaml
seqspec
seqspec of IGVFFI6309QCHM, IGVFFI9654PVVK
Jason Buenrostro, Broad
1.2 KB
validated