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INDEXED
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SequenceFile
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IGVFFI9635RIFE
IGVFFI9635RIFE
released
validated
Json view
File Set
IGVFDS1813UKUP
(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 6
File Format
fastq
Content Type
reads
md5sum
364a4170c0dd681520a181ff5a35f492
Content MD5sum
13e29fe2e05fb06e902d21c939a79e60
File Size
6.4 GB
Submitted File Name
igvf_009/nova2/igvf_009_B02_D_nova_N2_L001_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI
(
HG012077
—
Ali Mortazavi
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
6
Flowcell ID
H5VH3DSX7
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
177858630
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9611AGDB
MultiplexedSample
adrenal gland
,
kidney
multiplexed sample: Mus musculus WSB/EiJ (male, 69 days) kidney tissue; Mus musculus CAST/EiJ (male, 72 days) kidney tissue; ... and 126 more samples
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7100DGNS
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.5 GB
validated
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7737CQCX
yaml
seqspec
seqspec of IGVFFI9635RIFE, IGVFFI6047ZBMM
Ali Mortazavi, UCI
1.4 KB
validated