Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI9584NUBV
IGVFFI9584NUBV
released
validated
Json view
File Set
IGVFDS6729QWDJ
(single-cell RNA sequencing assay (SHARE-seq))
Summary
I1 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-DSS05-prim3-RNA.barcode.fastq.gz
md5sum
c2475881a6ae7eb2bb44168bd31a0999
Content MD5sum
f8799ead5f65559dfb903b57df391feb
File Size
3.1 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/barcode-file/DSS05-prim3-RNA.barcode.fastq.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I1
Average Read Length
32
Read Count
137761391
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0354RWOF
PrimaryCell
colon
Mus musculus C57BL/6J colon cell
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2670WNAJ
yaml
seqspec
seqspec of IGVFFI2250IDXN, IGVFFI6991OWAG, IGVFFI9584NUBV
Jason Buenrostro, Broad
1.2 KB
validated