IGVFFI9559EYAY

{
    "@context": "/terms/",
    "@id": "/sequence-files/IGVFFI9559EYAY/",
    "@type": [
        "SequenceFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI9559EYAY",
    "aliases": [
        "jesse-engreitz:220829_8merInsertion-Jurkat_NoStimulation-Amp_PPIF_promoter-BioRep1-FFrep1-BinB-PCRrep2_R1"
    ],
    "audit": {
        "INTERNAL_ACTION": [
            {
                "category": "mismatched status",
                "detail": "Released sequence file [IGVFFI9559EYAY](/sequence-files/IGVFFI9559EYAY/) has in progress subobject auxiliary set [IGVFDS6183RYAK](/auxiliary-sets/IGVFDS6183RYAK/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/sequence-files/IGVFFI9559EYAY/"
            }
        ]
    },
    "award": {
        "@id": "/awards/HG011972/",
        "component": "functional characterization"
    },
    "content_md5sum": "95f3892840fb10f91175d1ccfd0880ff",
    "content_type": "reads",
    "controlled_access": false,
    "creation_timestamp": "2023-12-05T18:46:20.403084+00:00",
    "file_format": "fastq",
    "file_set": "/auxiliary-sets/IGVFDS6183RYAK/",
    "file_size": 8068050,
    "gene_list_for": [],
    "href": "/sequence-files/IGVFFI9559EYAY/@@download/IGVFFI9559EYAY.fastq.gz",
    "illumina_read_type": "R1",
    "index": "CACATCCT:CAGT",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/jesse-engreitz/",
        "title": "Jesse Engreitz, Stanford"
    },
    "loci_list_for": [],
    "maximum_read_length": 150,
    "md5sum": "bdd455f9c58ce1af8d464ffc888fa83e",
    "mean_read_length": 150,
    "minimum_read_length": 150,
    "read_count": 414730,
    "release_timestamp": "2023-12-20T23:26:20.105703+00:00",
    "s3_uri": "s3://igvf-files/2023/12/05/ec577f7a-97f0-41bc-ac2e-1c7c007bc052/IGVFFI9559EYAY.fastq.gz",
    "schema_version": "14",
    "seqspecs": [],
    "sequencing_platform": "/platform-terms/EFO_0008566/",
    "sequencing_run": 1,
    "status": "released",
    "submitted_by": {
        "@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
        "title": "Michael Montgomery"
    },
    "submitted_file_name": "220829_pPPIF_JurkatVFF-Jurkat-PE2A-BFP-pPPIF-Amp_pPPIF_S2-BioRep1-FFRep1-BinB-PCRrep2_S58_R1_001.fastq.gz",
    "summary": "R1 reads from sequencing run 1",
    "upload_status": "validated",
    "uuid": "ec577f7a-97f0-41bc-ac2e-1c7c007bc052"
}