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INDEXED
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SequenceFile
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IGVFFI9543YVYI
IGVFFI9543YVYI
released
validated
Json view
File Set
IGVFDS7929XOMS
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8888
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8888_R1
md5sum
b2197d0791cacc5a42d59b67606f4a6d
Content MD5sum
c47d6f7fe6a2081c21595c1711fc3328
File Size
828 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2334_L5_SS-PKR-199_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8888
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
18475193
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4768GZVP
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 199)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2675MIGE
yaml
seqspec
seqspec of IGVFFI9543YVYI, IGVFFI1684JNQR, IGVFFI4521GQLY
Jason Buenrostro, Broad
1.3 KB
validated