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INDEXED
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SequenceFile
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IGVFFI9543FOFD
IGVFFI9543FOFD
released
validated
Json view
File Set
IGVFDS5083GBBF
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 7331
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_7331_R1
md5sum
ba56099568f2cb203d4652ebf18c9e5d
Content MD5sum
89d3ad981d0b26a1a2d67a46470ff4b1
File Size
6.9 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1913_L5_SS-PKR-436_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
7331
Flowcell ID
22KFF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
168345164
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4321WQTD
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0240SVTR
yaml
seqspec
seqspec of IGVFFI9543FOFD, IGVFFI0877MCVK
Jason Buenrostro, Broad
1.3 KB
validated