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INDEXED
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SequenceFile
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IGVFFI9533WTNC
IGVFFI9533WTNC
released
validated
Json view
File Set
IGVFDS0373FQFP
(reporter library targeting random selections genome-wide)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
tim-reddy:starr-seq-dna-fastq-k562-P007-R1
md5sum
00db8c2a44ea8725f55718a5f1b3a50d
Content MD5sum
ef10fbb9abdf30ee985b2517552369f4
File Size
7.0 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_1_STARR_seq/K562.starrseq.dna.pool7.R1.fastq.gz
Checkfiles Version
v17
Attribution
Tim Reddy, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AACNYKFM5
Lane
1
Sequencing Kit
NextSeq 2000 P3 XLEAP-SBS Reagent Kit
Illumina Read Type
R1
Average Read Length
301
Read Count
49332008
Files Derived From This File
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5386DLRD
bam
alignments
GRCh38 unfiltered alignments
Tim Reddy, Duke
7.0 GB
validated
IGVFFI7236IYAN
bam
alignments
custom assembly unfiltered alignments
Tim Reddy, Duke
7.3 GB
validated