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SequenceFile
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IGVFFI9532ANKQ
IGVFFI9532ANKQ
released
validated
Json view
File Set
IGVFDS4161OUYL
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 258
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2069_R1
bradley-bernstein:SS-LS_258_R1
buenrostro-bernstein:SS-LS_2069_R1
buenrostro-bernstein:SS-LS_258_R1
md5sum
959616531def5ba317caca07076af403
Content MD5sum
bbfbbb23d15fdb438a6e7560736b8434
File Size
987 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-198_L1_SS-PKR-132_SS-V1-LEFT-HALF_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
258
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
36416792
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8883WYCA
Tissue
brain
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 132)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7278ACIY
yaml
seqspec
seqspec of IGVFFI9532ANKQ, IGVFFI4275DDIL
Jason Buenrostro, Broad
1.2 KB
validated