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INDEXED
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SequenceFile
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IGVFFI9513FIXP
IGVFFI9513FIXP
released
validated
Json view
File Set
IGVFDS1321OWWX
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 876
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_876_R1
md5sum
f8fd03340f61aca8c6fb18cff60bd857
Content MD5sum
32f0b8b67241953eac47255314c4d93d
File Size
880 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-931_L5_SS-PKR-205_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
876
Flowcell ID
22773CLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
15085098
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7296NMXX
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 205)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4752ODAF
yaml
seqspec
seqspec of IGVFFI9513FIXP, IGVFFI4399GBRO, IGVFFI6549CDPK
Jason Buenrostro, Broad
1.4 KB
validated