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INDEXED
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SequenceFile
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IGVFFI9456PIMT
IGVFFI9456PIMT
released
validated
Json view
File Set
IGVFDS7635GZJI
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 9053
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_9053_R1
md5sum
ff6342ef836b76bcd47219e85ae22681
Content MD5sum
b497d23e7b4cfdbb32f744d501ba21aa
File Size
654 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2307_L7_SS-PKR-182_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
9053
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
14577399
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2051NVYB
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 182)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6238VGRG
yaml
seqspec
seqspec of IGVFFI9456PIMT, IGVFFI4263RYSG, IGVFFI5920JPUW
Jason Buenrostro, Broad
1.3 KB
validated