IGVFFI9453JJYU

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8552WQEE(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X028_G5_P028_L004_I2

md5sum

b08268fa7c1fa23bd276eb3f3e4e6835

Content MD5sum

cc89bfe631cd82be11a4cbb8bc896472

File Size

1.8 GB

Submitted File Name

Multiome_RNA_X028_G5_L005_P028_S22_L004_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HV737DSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

299287421

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4526FRYV

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 79 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (female, 82 years) middle temporal gyrus tissue associated with cerebral amyloid angiopathy; ... and 10 more samples