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INDEXED
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SequenceFile
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IGVFFI9452ACWP
IGVFFI9452ACWP
released
validated
Json view
File Set
IGVFDS6356BAJX
(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 6
File Format
fastq
Content Type
reads
md5sum
0f49ce357d15accc8c6712c0a532a406
Content MD5sum
384e760f4176aa55f5afbc6fb7e8add8
File Size
6.4 GB
Submitted File Name
igvf_010/nova2/igvf_010_B11_D_nova_N2_L002_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI
(
HG012077
—
Ali Mortazavi
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
6
Flowcell ID
H7YTNDSX7
Lane
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
165989484
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM5918MBLK
MultiplexedSample
gastrocnemius
,
kidney
multiplexed sample: Mus musculus NZO/H1LtJ (female, 69 days) gastrocnemius tissue; Mus musculus WSB/EiJ (male, 69 days) kidney tissue; ... and 126 more samples
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9766SONO
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.6 GB
validated
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7622TSRB
yaml
seqspec
seqspec of IGVFFI9717BTTR, IGVFFI9452ACWP
Ali Mortazavi, UCI
1.3 KB
validated