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INDEXED
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SequenceFile
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IGVFFI9450XXZJ
IGVFFI9450XXZJ
released
validated
Json view
File Set
IGVFDS0079JXLN
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 9022
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_9022_R1
md5sum
2426f23f7958c06764e559b5e07edc18
Content MD5sum
fd143d67a28b474b2486ec6bff4bfa5b
File Size
594 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2276_L7_SS-PKR-173_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
9022
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
13171388
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3457JHWU
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 173)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3732QEJF
yaml
seqspec
seqspec of IGVFFI9450XXZJ, IGVFFI4558BEGZ, IGVFFI1996RQJG
Jason Buenrostro, Broad
1.3 KB
validated