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INDEXED
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SequenceFile
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IGVFFI9424HRUH
IGVFFI9424HRUH
released
validated
Json view
File Set
IGVFDS6361NSJR
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 62
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1982_R1
bradley-bernstein:SS-LS_62_R1
buenrostro-bernstein:SS-LS_1982_R1
buenrostro-bernstein:SS-LS_62_R1
md5sum
c7e0e47077e0bbd87365eb4378129910
Content MD5sum
a36bf8e55e8d8afd49a4c3fd9d829509
File Size
453 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-135_L1_SS-PKR-130_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
62
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
17164356
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8719IQYM
Tissue
brain
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 130)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2860ERJA
yaml
seqspec
seqspec of IGVFFI9424HRUH, IGVFFI7516RQYI
Jason Buenrostro, Broad
1.2 KB
validated
Attribution
Award
HG011986
Principal Investigator(s)
Bradley Bernstein
,
Jason Buenrostro
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad