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INDEXED
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SequenceFile
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IGVFFI9393AYOA
IGVFFI9393AYOA
released
validated
Json view
File Set
IGVFDS7019WXPW
(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 8
File Format
fastq
Content Type
reads
md5sum
a809df9f413b27d74d6352d642fb4178
Content MD5sum
b9fc82395a9a49e7d6749e82b877aee5
File Size
6.3 GB
Submitted File Name
igvf_009/nova2/igvf_009_B07_D_nova_N2_L004_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI
(
HG012077
—
Ali Mortazavi
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
8
Flowcell ID
H5VH3DSX7
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
165786020
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9250IOWY
MultiplexedSample
adrenal gland
,
kidney
multiplexed sample: Mus musculus WSB/EiJ (male, 69 days) kidney tissue; Mus musculus CAST/EiJ (male, 72 days) kidney tissue; ... and 126 more samples
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0155XOPY
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.5 GB
validated
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6738PNHV
yaml
seqspec
seqspec of IGVFFI9393AYOA, IGVFFI6161WLXQ
Ali Mortazavi, UCI
1.4 KB
validated