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IGVFFI9383PCKM

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS3520MQEA(single-nucleus ATAC-seq (10x multiome))
Summary
R3 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_ATAC_X036_G5_P037_L001_R3
md5sum
bb0f2dc3b6c56d9d0ac0e6c3f7ce78dd
Content MD5sum
90a15ecdd892f0c08da4da07d68481e2
File Size
6.7 GB
Submitted File Name
Multiome_ATAC_X036_G5_L005_P037_S3_L001_R3_001.fastq.gz
Checkfiles Version
v20

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
H5VM5DSX7
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R3
Average Read Length
49
Read Count
209504462

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF