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INDEXED
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SequenceFile
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IGVFFI9379RGKR
IGVFFI9379RGKR
released
validated
Json view
File Set
IGVFDS9664AFSO
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4066
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4066_R1
md5sum
a8e68d6b67472b7dde64d71a6f089a56
Content MD5sum
e51234fd2dde7c058bec33988d2e82d2
File Size
566 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-743_L2_SS-PKR-205_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
4066
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
10109347
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7296NMXX
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 205)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5753HEPL
yaml
seqspec
seqspec of IGVFFI9379RGKR, IGVFFI8274DZFR, IGVFFI6036GDSR
Jason Buenrostro, Broad
1.3 KB
validated