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IGVFFI9371CQEZ

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS5264XYMB(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_ATAC_X033_G1_P033_L001_R1
md5sum
2874f65e43d8ce9074af42febfd1dd13
Content MD5sum
039151e8536d81d3368219e958fd3c86
File Size
9.4 GB
Submitted File Name
Multiome_ATAC_X033_G1_L001_P033_S3_L001_R1_001.fastq.gz
Checkfiles Version
v20

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
H2WFTDSX7
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
171459017

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 80 years) posterior cingulate gyrus tissue; ... and 10 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF