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INDEXED
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SequenceFile
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IGVFFI9317AWYL
IGVFFI9317AWYL
released
validated
Json view
File Set
IGVFDS2176CGLV
(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 2
File Format
fastq
Content Type
reads
md5sum
a1361e42439fcd7ef2363d0dd19a0960
Content MD5sum
b10b52e599641c1631407f4aea0b438b
File Size
6.3 GB
Submitted File Name
igvf_010/nova1/igvf_010_B07_D_nova_N1_L002_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI
(
HG012077
—
Ali Mortazavi
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Flowcell ID
H7TLWDSX7
Lane
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
183603378
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM8762UKKH
MultiplexedSample
gastrocnemius
,
kidney
multiplexed sample: Mus musculus NZO/H1LtJ (female, 69 days) gastrocnemius tissue; Mus musculus WSB/EiJ (male, 69 days) kidney tissue; ... and 126 more samples
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2387FMTZ
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.4 GB
validated
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7843ZKJO
yaml
seqspec
seqspec of IGVFFI2813TFQL, IGVFFI9317AWYL
Ali Mortazavi, UCI
1.3 KB
validated