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IGVFFI9305UBWA

released
validated
File Set
IGVFDS7747XDUI(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 254
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2054_R2
bradley-bernstein:SS-LS_254_R2
buenrostro-bernstein:SS-LS_2054_R2
buenrostro-bernstein:SS-LS_254_R2
md5sum
0abca91b77eee5df8afd22588dd0e0df
Content MD5sum
4ac00925dea74dcaecb708ea8290310d
File Size
742 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-183_L1_SS-PKR-132_SS-V1-RIGHT-HALF_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
254
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
14462503

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 132)

Files Derived From This File

2 items
bam
alignments
GRCm39 unfiltered alignments
Jason Buenrostro, Broad
6.1 GB
validated
bed
fragments
GRCm39 unfiltered fragments
Jason Buenrostro, Broad
845 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI9201WYHO, IGVFFI9305UBWA
Jason Buenrostro, Broad
1.2 KB
validated