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SequenceFile
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IGVFFI9268DRRP
IGVFFI9268DRRP
released
validated
Json view
File Set
IGVFDS9590NQAN
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4096
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4096_R1
md5sum
e62fea9c0a08e2ed78daa1eb916d8d37
Content MD5sum
e8682e4df34ecca20a5b68016983b8b7
File Size
1.6 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-727_L3_SS-PKR-180_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
4096
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
30560741
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4941CPCX
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 180)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2361LFWO
yaml
seqspec
seqspec of IGVFFI9268DRRP, IGVFFI2079SSMH, IGVFFI8980FETA
Jason Buenrostro, Broad
1.3 KB
validated