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INDEXED
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SequenceFile
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IGVFFI9222OWBK
IGVFFI9222OWBK
released
validated
Json view
File Set
IGVFDS0580JTOM
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4388
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4388_R1
md5sum
403f3bec254a06e11bff619a34bf2638
Content MD5sum
4749fc7fd35d36adf2084913d96f7906
File Size
3.6 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-539_L2_SS-PKR-172_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4388
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
57067948
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5762CPQM
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 172)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4943JLGB
yaml
seqspec
seqspec of IGVFFI9222OWBK, IGVFFI5801SGBF, IGVFFI3842UDJP
Jason Buenrostro, Broad
1.3 KB
validated