IGVFFI9204THGK

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7626QFRS(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X014_G2_P012_L004_R1

md5sum

8243e99b15293cff9552c2af571b60a4

Content MD5sum

a0106a6390e3b24919515b627b7084e6

File Size

5.3 GB

Submitted File Name

Multiome_RNA_X014_G2_L002_P012_S28_L004_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HJ7TNDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

252490827

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM6111OIGC

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 89 years) cerebellar cortex tissue; Homo sapiens (male, 80 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples