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INDEXED
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SequenceFile
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IGVFFI9190DZRH
IGVFFI9190DZRH
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS1887NZWO
(single-nucleus RNA sequencing assay (10x multiome))
Summary
I2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_RNA_RP025_G5_P070_L005_I2
md5sum
75b42dccf77846e4a8ed3a0460c4f16f
Content MD5sum
b280057cf00906212f6b237dae803668
File Size
995 MB
Submitted File Name
Multiome_RNA_RP025_G5_L005_P070_S25_L005_I2_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
19RTCA4LE
Lane
5
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
I2
Average Read Length
10
Read Count
145335022
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM4968PVUL
MultiplexedSample
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 8 more samples