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INDEXED
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SequenceFile
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IGVFFI9160OFRT
IGVFFI9160OFRT
released
validated
Json view
File Set
IGVFDS4624JCMI
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 8348
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8348_R2
md5sum
7a64db7c880d93485f90ac613291664a
Content MD5sum
bee397f2f84e772746bdb1d4b9ccf26a
File Size
1.9 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2234_L8_SS-PKR-576_SS-V1-RIGHT-HALF_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8348
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
199
Read Count
33389139
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7633DIYU
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 576)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2791ZIPI
yaml
seqspec
seqspec of IGVFFI6378KBKR, IGVFFI9160OFRT
Jason Buenrostro, Broad
1.2 KB
validated