IGVFFI9158VFIB

released
validated
{
    "@context": "/terms/",
    "@id": "/sequence-files/IGVFFI9158VFIB/",
    "@type": [
        "SequenceFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI9158VFIB",
    "assay_titles": [],
    "audit": {},
    "award": {
        "@id": "/awards/HG011972/",
        "component": "functional characterization"
    },
    "content_md5sum": "852ab4fd25aac5abad6d8c44808facdc",
    "content_type": "reads",
    "controlled_access": false,
    "creation_timestamp": "2024-04-23T17:06:41.920606+00:00",
    "externally_hosted": false,
    "file_format": "fastq",
    "file_set": {
        "@id": "/construct-library-sets/IGVFDS8953DFJK/",
        "accession": "IGVFDS8953DFJK",
        "file_set_type": "guide library",
        "summary": "Guide (sgRNA) library targeting sequence variants, transcription start sites in NOS3"
    },
    "file_size": 37687990,
    "gene_list_for": [],
    "href": "/sequence-files/IGVFFI9158VFIB/@@download/IGVFFI9158VFIB.fastq.gz",
    "illumina_read_type": "I1",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/jesse-engreitz/",
        "title": "Jesse Engreitz, Stanford"
    },
    "loci_list_for": [],
    "maximum_read_length": 8,
    "md5sum": "e7dddf3a0f40d35f761a9ff2ff276041",
    "mean_read_length": 8,
    "minimum_read_length": 8,
    "read_count": 4833191,
    "release_timestamp": "2024-06-22T00:20:31.487468+00:00",
    "s3_uri": "s3://igvf-files/2024/04/23/76a215f0-3e6b-47eb-a10d-13ebcd3add8f/IGVFFI9158VFIB.fastq.gz",
    "schema_version": "14",
    "seqspecs": [],
    "sequencing_kit": "MiSeq Reagent Kit v2",
    "sequencing_platform": {
        "@id": "/platform-terms/EFO_0004205/",
        "term_name": "Illumina MiSeq"
    },
    "sequencing_run": 1,
    "status": "released",
    "submitted_by": {
        "@id": "/users/3bd6f74c-8cf3-4c35-a94d-0c7c11654815/",
        "title": "Chongyon Park"
    },
    "submitted_file_name": "/Desktop/NOS3/NOS3_CRISPRi_guides/P219_S1_I1_001.fastq.gz",
    "summary": "I1 reads from sequencing run 1",
    "upload_status": "validated",
    "uuid": "76a215f0-3e6b-47eb-a10d-13ebcd3add8f"
}