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SequenceFile
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IGVFFI9102PSRA
IGVFFI9102PSRA
preview
validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS5278MDTO
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R1 reads from sequencing run 543
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX8-SC1_snRNA_S2_R1
md5sum
464eb3bbad6cf93cf1b09114de3701fe
Content MD5sum
aa0592a45dd2ec4db69c6b018af8b793
File Size
7.2 GB
Submitted File Name
production_data/xhlt1/data/single_cell_GEX/raw/XHLT1-POOL-XX8-SC1/AH2YMLDSX3_ICJY03/XHLT1-POOL-XX8-SC1-GEX_S13_L003_R1_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
543
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
216206776
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM3449BLEO
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 27.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 48.0 years) peripheral blood mononuclear cell; ... and 17 more samples