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SequenceFile
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IGVFFI9088AFNY
IGVFFI9088AFNY
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS4064ZVTG
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_RNA_X006_G3_P004_L001_R1
md5sum
869c8de7012b2c5d461de138738d0d84
Content MD5sum
5e7639d4b91c13330d45030008375ca9
File Size
7.4 GB
Submitted File Name
Multiome_RNA_PD_15-70_SN_X006_S03_L003_B1_T1_P004_S15_L001_R1_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
H5TLFDSX5
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
101
Read Count
113244934
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9093ETCZ
Tissue
substantia nigra
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
Homo sapiens (male, 73 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment